Search results for " Germplasm"

showing 10 items of 26 documents

S-genotype identification, genetic diversity and structure analysis of Italian sweet cherry germplasm

2017

In this study, 186 local sweet cherry accessions from 12 Italian regions, plus eight reference accessions, were analysed for the first time, using 13 microsatellite markers. Moreover, their S-incompatibility genotypes were identified with consensus primers for the S-RNase and SFB genes. A total of 161 unique genotypes were found; 18 groups of synonyms, along with the discovery of cases of misidentification. The average number of alleles per locus was 9.7, the mean expected heterozygosity (He) was 0.63, the mean observed heterozygosity (Ho) was 0.65 and the mean polymorphic information content (PIC) was 0.58. The structure analysis revealed the presence of six populations, which reflected in…

0106 biological sciences0301 basic medicineGermplasmLocus (genetics)ConservationBiologyPrunus aviumHorticulture01 natural sciencesGermplasm resourcesSelf(in)compatibilityLoss of heterozygosity03 medical and health sciencesGeneticGenotypeGeneticsGenetic variabilityAlleleMolecular BiologyConservation; Genetic variability; Germplasm resources; Prunus avium; S-alleles; Self(in)compatibility; Forestry; Molecular Biology; Genetics; HorticultureGeneticsGenetic diversityfood and beveragesForestrySettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeS-alleles030104 developmental biologyS-alleleMicrosatelliteGenetic variabilityGermplasm resource010606 plant biology & botany
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Algerian Olive Germplasm and Its Relationships with the Central-Western Mediterranean Varieties Contributes to Clarify Cultivated Olive Diversificati…

2021

Olive tree with its main final product, olive oil, is an important element of Mediterranean history, considered the emblematic fruit of a civilization. Despite its wide diffusion and economic and cultural importance, its evolutionary and phylogenetic history is still difficult to clarify. As part of the Mediterranean basin, Algeria was indicated as a secondary diversification center. However, genetic characterization studies from Maghreb area, are currently underrepresented. In this context, we characterized 119 endemic Algerian accessions by using 12 microsatellite markers with the main goal to evaluate the genetic diversity and population structure. In order to provide new insights about …

0106 biological sciences0301 basic medicineGermplasmMediterranean climateBiodiversityContext (language use)Plant ScienceDiversification (marketing strategy)01 natural sciencesMediterranean BasinArticlephylogenesis analysis03 medical and health sciencesSettore AGR/07 - Genetica Agrarialcsh:BotanyAlgerian olive germplasmEcology Evolution Behavior and Systematicsbiodiversityphylogenesis analysiGenetic diversityEcologyPhylogenetic treeAgroforestrylcsh:QK1-989030104 developmental biologyGeography010606 plant biology & botanyPlants
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Parentage Atlas of Italian Grapevine Varieties as Inferred From SNP Genotyping.

2021

The Italian grape germplasm is characterized by a high level of richness in terms of varieties number, with nearly 600 wine grape varieties listed in the Italian National Register of Grapevine Varieties and with a plethora of autochthonous grapes. In the present study an extended SNP genotyping has been carried out on Italian germplasm of cultivated Vitis vinifera subsp. sativa and Vitis hybrids. Several hundred Italian varieties maintained in the repositories of scientific Institutions and about one thousand additional varieties derived from previous studies on European, Southern Italy, Magna Graecia and Georgian germplasm were considered. The large genotyping data obtained were used to ch…

0106 biological sciences0301 basic medicineGermplasmPlant Sciencecultivar geographic areas; Italian founder varieties; Italian germplasm; parent-offspring relationships; pedigree; second-degree relationships; single nucleotide polymorphism; Vitis viniferalcsh:Plant culture01 natural sciencesWine grape03 medical and health sciencesPeninsulasingle nucleotide polymorphismlcsh:SB1-1110CultivarItalian founder varietiesVitis viniferaHybridOriginal Researchcultivar geographic areasgeography.geographical_feature_categorypedigreeVariety (linguistics)second-degree relationshipsGenealogySNP genotyping030104 developmental biologyGeographyItalian germplasmVitis viniferacultivar geographic areas Italian germplasm Italian founder varieties parent-offspring relationships pedigree second-degree relationships single nucleotide polymorphism Vitis viniferaparent-offspring relationships010606 plant biology & botanyFrontiers in plant science
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Genetic diversity in a collection of Italian long storage tomato landraces as revealed by SNP markers array

2019

Tomato (Solanum lycopersicum L.) is one of the most important crops worldwide. In this study, we used 7720 genome-wide SNPs to characterize the genetic diversity within a tomato germplasm collection enriched with 64 accessions from southern Italy of the so called "da serbo" type i.e. drought-tolerant and long storage landraces. Notwithstanding the relatively small collection area, 1575 (20.4%) polymorphic SNPs, mostly on Chr11, detected considerable levels of genetic variation. Maximum parsimony analysis of genetic distance revealed four main clusters and clearly separated most "da serbo" landraces from the outgroups. One of the clusters grouped the landraces from the Mount Vesuvius area, t…

0106 biological sciences0301 basic medicineGermplasmdrought toleranceSingle-nucleotide polymorphismPlant ScienceBiology01 natural sciences03 medical and health sciencesSettore AGR/07 - Genetica AgrariaGenetic variationAlleleEcology Evolution Behavior and SystematicsGenetic diversitybusiness.industryfungifruit qualityfood and beveragesbiology.organism_classificationSettore AGR/02 - Agronomia E Coltivazioni Erbaceedrought tolerance; fruit quality; shelf life; Solanum lycopersicum germplasm; SolCAP Infinium arrayBiotechnologySolanum lycopersicum germplasm030104 developmental biologyGenetic distanceGenetic markerSolanum lycopersicum germplasm shelf life SolCAP Infinium array fruit quality drought toleranceshelf lifeSolanumSolCAP Infinium arraybusiness010606 plant biology & botanyPlant Biosystems - An International Journal Dealing with all Aspects of Plant Biology
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SILVOLIVE, a Germplasm Collection of Wild Subspecies With High Genetic Variability as a Source of Rootstocks and Resistance Genes for Olive Breeding

2020

15 páginas.- 5 figuras.- 1 tabla.- referencias.- The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fpls.2020.00629/full#supplementary-material

0106 biological sciences0301 basic medicineGermplasmmolecular markersBranching[SDV]Life Sciences [q-bio]media_common.quotation_subjectPlant Sciencelcsh:Plant cultureBiologySubspecies01 natural sciencesAdaptabilityvigor03 medical and health sciencesgenetic variabilitybranchingwild germplasmlcsh:SB1-1110Genetic variabilityCultivarOlea europaeaComputingMilieux_MISCELLANEOUSmedia_commonHybridRootstocksOriginal ResearchGraftingMolecular markersfood and beverages15. Life on landrootstockbiology.organism_classificationgraftingHorticulture030104 developmental biologyOleaVigorGenetic variabilityRootstockWild germplasm010606 plant biology & botanyF30 Plant genetics and breeding
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In vitro propagation of the relict laperinne’s olive (Olea europaea L. subsp. laperrinei)

2017

Olea europaea L. subsp. laperrinei (Oleaceae) is an endemic taxon of the mountainous regions of central Sahara, consisting of currently fragmented and small relict populations. The tree can propagate vegetatively or by seed, but no recent natural regeneration was observed in the Algerian massive populations, some of which are considered threatened with extinction. Sterile triploid individuals were also identified in some populations showing increasing vigour. As a result of its long persistence and despite its rarity, the Laperrine's olive is an iconic component of Saharan mountain ecosystems. The aim of this study is to develop an efficient micropropagation protocol for both diploid and tr…

0106 biological sciences0301 basic medicinemicropropagationmolecular markerstriploidsPlant ScienceEndangered taxonolive tree01 natural sciences03 medical and health scienceschemistry.chemical_compoundMurashige and Skoog mediumBotanyEcology Evolution Behavior and Systematicsbiologyfungifood and beveragesbiology.organism_classificationthreatened germplasm030104 developmental biologyTaxonMicropropagationchemistryOleaOleaceaeShootThreatened speciesZeatin010606 plant biology & botany
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Organogenesis and encapsulation of in vitro-derived propagules of Carrizo citrange [Citrus sinensis (L.) Osb. × Poncirius trifoliata (L.) Raf]

2011

Due to widespread polyembryony, Citrus rootstocks are usually propagated by open-pollinated seed germination, although micropropagation offers many advantages. Encapsulation technology has recently attracted the interest of researchers in the field of plant propagation because it combines the advantages of zygotic or gamic seeds with those of micropropagation. In this study, we examined the encapsulation of Carrizo citrange uninodal microcuttings (3–4 mm long) and evaluated the influence of the calcium alginate coating, a short time storage at cold temperature, and different sowing substrates on the viability and regrowth of the explants. A secondary aim was to develop an efficient protocol…

Adventitious shoot Cytokinins Explant type Micropropagation Germplasm storage Synthetic seedmicropropagationPlant propagationregenerative processesregenerative processes; tissue culture; micropropagation; microcutting; alginate matrixOrganogenesisHorticultureBiologyBasal shootMicropropagationShootBotanyalginate matrixEpicotyltissue culturemicrocuttingRootstockExplant culturePlant Cell, Tissue and Organ Culture (PCTOC)
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Use of seeds from local loquat ecotypes for rootstock production

2014

In Italy loquat (Eriobotrya japonica, Lindl) seedlings are commonly produced in nurseries as rootstocks for commercial loquat orchards. Seedling production is characterized by low germination percentage and a slow plant growth.The aim of this study was to evaluate local ecotypes seeds of loquat for seedlings production. Some ecotypes (Bianco dolce, BRT20, Claudia, Fiore, La Mantia and Marcenò) and international cultivars (Algerie, Golden Nugget, Magdal, Peluche and Tanaka) were compared. Loquat seeds of 11 different genotypes were collected from mature fruits in commercial orchards. Seeds were extracted and washed after separating from flesh. A pretreatment of 24 hr of seed soaking in a sol…

Eriobotrya japonica seedling germplasm
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A study of thyme germplasm in Sicily

2009

hyme is characteristic of the Mediterranean and is of interest for its multifunctional nature. It is widely used in seasoning and flavouring, in herbal products and cosmetics. The versatility of this species means it is also useful in the protection of areas prone to erosion or an ornamental plant when designing low-maintenance gardens. Thyme germplasm constitutes a large part of the wild flora in Sicily and is a potentially useful source of genetic variability. On the basis of this, in the two-year period from 2004-2005, research was carried out on wild thyme accessions. These were used to evaluate both its productivity and individual biotypes with the functional characteristics most sough…

GermplasmAgronomyGenetic resourcesbusiness.industryCrop yieldGenetic variationHorticultureBiologybusinessProductivityBiotechnologyThymus sp. genetic resources germplasm enedemic bio-agronomic evaluationSettore AGR/02 - Agronomia E Coltivazioni Erbacee
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Yield and Fruit Quality Characterization of Eight Old Sicilian Apple Cultivars

2011

In this trial, we examined the quality of eight old Sicilian apple cultivars (‘Cannamelo’, ‘Cardinale’, ‘Gelata Cola’, ‘Gelata’, ‘Granatino’, ‘San Giuseppe’, ‘Virticchiaro’, ‘Zitella’) and a commercial one (‘Annurca’ traditional clone) through bio-agronomic performances and chemical-physical analyses. We also analyzed flowering time, ripening time, pomological characteristics, and generated a specific descriptor list that indicates a great variability among the cultivars. The data obtained showed interesting characteristics in ‘Granatino’, ‘Virticchiaro’, and ‘Zitella’, such as total soluble solid, fruit size, peel cover color, yield efficiency, and crop load.

GermplasmEcologyYield efficiencyRipeningTitratable acidPlant ScienceHorticultureBiologylanguage.human_languageCropSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeHorticultureAgronomyYield (wine)languageCultivarMalus domestica germplasm descriptor list soluble solids flesh firmness titratable acidity cover colorAgronomy and Crop ScienceSicilian
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